2015-09-16 35 views
1

我正在運行spark 1.2.1來訓練一個隨機森林。我在AWS EC2上有一個主節點和一個工作節點設置,分配的內存總共爲96GB。我玩各種平行值(32,64,6400),並且我一直得到相同的錯誤。根據spark UI,我的RDD是277KB,100%緩存在內存中,應該很小。我的火花背景如下:Spark python MLlib Random Forest內存不足錯誤

spark.executor.memory 100000m 
spark.driver.memory 90000m 
spark.driver.maxResultSize 0 
spark.storage.memoryFraction 0.6 
spark.default.parallelism 6400 
spark.eventLog.enabled true 
spark.executor.extraLibraryPath /root/ephemeral-hdfs/lib/native/ 
spark.executor.extraClassPath /root/ephemeral-hdfs/conf 

# for spark version < 1.4.0 
spark.tachyonStore.url tachyon://10.0.29.29:19998 
# for spark version >= 1.4.0 
spark.externalBlockStore.url tachyon://10.0.29.29:19998 

的錯誤如下:

15/09/16 21:32:38 INFO scheduler.TaskSetManager: Finished task 6397.0 in stage 31.0 (TID 51197) in 4 ms on 10.0.29.186 (6398/6400) 
15/09/16 21:32:38 INFO scheduler.TaskSetManager: Finished task 6398.0 in stage 31.0 (TID 51198) in 4 ms on 10.0.29.186 (6399/6400) 
15/09/16 21:32:38 INFO scheduler.TaskSetManager: Finished task 6399.0 in stage 31.0 (TID 51199) in 4 ms on 10.0.29.186 (6400/6400) 
15/09/16 21:32:38 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 31.0, whose tasks have all completed, from pool 
15/09/16 21:32:38 INFO scheduler.DAGScheduler: ResultStage 31 (collect at DecisionTree.scala:977) finished in 1.843 s 
15/09/16 21:32:38 INFO scheduler.DAGScheduler: Job 31 finished: collect at DecisionTree.scala:977, took 1.889432 s 
15/09/16 21:32:46 INFO storage.BlockManagerInfo: Removed broadcast_32_piece0 on 10.0.29.44:60955 in memory (size: 3.9 KB, free: 45.5 GB) 
15/09/16 21:32:46 INFO storage.BlockManagerInfo: Removed broadcast_32_piece0 on 10.0.29.186:43335 in memory (size: 3.9 KB, free: 50.5 GB) 
15/09/16 21:34:24 INFO storage.MemoryStore: ensureFreeSpace(46872) called with curMem=0, maxMem=48837427200 
15/09/16 21:34:24 INFO storage.MemoryStore: Block broadcast_33 stored as values in memory (estimated size 45.8 KB, free 45.5 GB) 
15/09/16 21:34:24 INFO storage.MemoryStore: ensureFreeSpace(46927) called with curMem=46872, maxMem=48837427200 
15/09/16 21:34:24 INFO storage.MemoryStore: Block broadcast_33_piece0 stored as bytes in memory (estimated size 45.8 KB, free 45.5 GB) 
15/09/16 21:34:24 INFO storage.BlockManagerInfo: Added broadcast_33_piece0 in memory on 10.0.29.44:60955 (size: 45.8 KB, free: 45.5 GB) 
15/09/16 21:34:24 INFO spark.SparkContext: Created broadcast 33 from broadcast at DecisionTree.scala:592 
15/09/16 21:35:43 INFO rdd.MapPartitionsRDD: Removing RDD 24 from persistence list 
15/09/16 21:35:43 INFO storage.BlockManager: Removing RDD 24 
Traceback (most recent call last): 
    File "<stdin>", line 1, in <module> 
    File "random_forest_spark.py", line 142, in trainModel 
    impurity='gini', maxDepth=4, maxBins=32) 
    File "/root/spark/python/pyspark/mllib/tree.py", line 352, in trainClassifier 
    maxDepth, maxBins, seed) 
    File "/root/spark/python/pyspark/mllib/tree.py", line 270, in _train 
    maxDepth, maxBins, seed) 
    File "/root/spark/python/pyspark/mllib/common.py", line 128, in callMLlibFunc 
    return callJavaFunc(sc, api, *args) 
    File "/root/spark/python/pyspark/mllib/common.py", line 121, in callJavaFunc 
    return _java2py(sc, func(*args)) 
    File "/root/spark/python/lib/py4j-0.8.2.1-src.zip/py4j/java_gateway.py", line 538, in __call__ 
    File "/root/spark/python/lib/py4j-0.8.2.1-src.zip/py4j/protocol.py", line 300, in get_return_value 
py4j.protocol.Py4JJavaError: An error occurred while calling o169.trainRandomForestModel. 
: java.lang.OutOfMemoryError 
     at java.io.ByteArrayOutputStream.hugeCapacity(ByteArrayOutputStream.java:123) 
     at java.io.ByteArrayOutputStream.grow(ByteArrayOutputStream.java:117) 
     at java.io.ByteArrayOutputStream.ensureCapacity(ByteArrayOutputStream.java:93) 
     at java.io.ByteArrayOutputStream.write(ByteArrayOutputStream.java:153) 
     at java.io.ObjectOutputStream$BlockDataOutputStream.drain(ObjectOutputStream.java:1876) 
     at java.io.ObjectOutputStream$BlockDataOutputStream.setBlockDataMode(ObjectOutputStream.java:1785) 
     at java.io.ObjectOutputStream.writeObject0(ObjectOutputStream.java:1188) 
     at java.io.ObjectOutputStream.writeObject(ObjectOutputStream.java:347) 
     at org.apache.spark.serializer.JavaSerializationStream.writeObject(JavaSerializer.scala:44) 
     at org.apache.spark.serializer.JavaSerializerInstance.serialize(JavaSerializer.scala:81) 
     at org.apache.spark.util.ClosureCleaner$.ensureSerializable(ClosureCleaner.scala:312) 
     at org.apache.spark.util.ClosureCleaner$.org$apache$spark$util$ClosureCleaner$$clean(ClosureCleaner.scala:305) 
     at org.apache.spark.util.ClosureCleaner$.clean(ClosureCleaner.scala:132) 
     at org.apache.spark.SparkContext.clean(SparkContext.scala:1891) 
     at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1.apply(RDD.scala:683) 
     at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1.apply(RDD.scala:682) 
     at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:148) 
     at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:109) 
     at org.apache.spark.rdd.RDD.withScope(RDD.scala:286) 
     at org.apache.spark.rdd.RDD.mapPartitions(RDD.scala:682) 
     at org.apache.spark.mllib.tree.DecisionTree$.findBestSplits(DecisionTree.scala:613) 
     at org.apache.spark.mllib.tree.RandomForest.run(RandomForest.scala:235) 
     at org.apache.spark.mllib.tree.RandomForest$.trainClassifier(RandomForest.scala:289) 
     at org.apache.spark.mllib.api.python.PythonMLLibAPI.trainRandomForestModel(PythonMLLibAPI.scala:666) 
     at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) 
     at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) 
     at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 
     at java.lang.reflect.Method.invoke(Method.java:606) 
     at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:231) 
     at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:379) 
     at py4j.Gateway.invoke(Gateway.java:259) 
     at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:133) 
     at py4j.commands.CallCommand.execute(CallCommand.java:79) 
     at py4j.GatewayConnection.run(GatewayConnection.java:207) 
     at java.lang.Thread.run(Thread.java:745) 

我的數據是LabeledPoint型RDD和我的訓練碼是相當直截了當:

(trainingData, testData) = data.randomSplit([0.7, 0.3]) 
    model = RandomForest.trainClassifier(trainingData, numClasses=2, categoricalFeaturesInfo={}, 
            numTrees=3, featureSubsetStrategy="auto", 
            impurity='gini', maxDepth=4, maxBins=32) 

回答

0

原來我的Tachyon服務器IP不正確。配置正確的Tachyon服務器IP解決了我的問題。