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使用gfortran支持的Lion Python 2.6構建numpy

2012-08-05 52 views
5

我試圖在Lion OS自帶的Python 2.6上安裝numpy和scipy。使用gfortran支持的Lion Python 2.6構建numpy

以下是具體步驟我服用：

  • 安裝的
    • 獅子乾淨的副本，
    • 更新，
    • 的Xcode（從應用程序商店），
    • 家釀，
    • gfortran，
    • pip，
    • 和numpy。
  • 下一步是嘗試升級numpy。
    這是發生了什麼：。（我無法發佈完整的日誌，因爲我是一個有限的用戶

Downloading/unpacking numpy from http://pypi.python.org/packages/source/n/numpy/numpy-  1.6.2.zip#md5=7e13c931985f90efcfa0408f845d6fee
 


Downloading numpy-1.6.2.zip (2.9Mb): 2.9Mb downloaded Running setup.py egg_info for package numpy Running from numpy source directory.non-existing path in 'numpy/distutils': 'site.cfg' F2PY Version 2 blas_opt_info: FOUND: extra_link_args = ['-Wl,-framework', '-Wl,Accelerate'] define_macros = [('NO_ATLAS_INFO', 3)] extra_compile_args = ['-msse3', '- I/System/Library/Frameworks/vecLib.framework/Headers']
 

lapack_opt_info: 
    FOUND: 
    extra_link_args = ['-Wl,-framework', '-Wl,Accelerate'] 
    define_macros = [('NO_ATLAS_INFO', 3)] 
    extra_compile_args = ['-msse3'] 

build_src 
building py_modules sources 
building library "npymath" sources 
customize NAGFCompiler 
Could not locate executable f95 
customize AbsoftFCompiler 
Could not locate executable f90 
Could not locate executable f77 
customize IBMFCompiler 
Could not locate executable xlf90 
Could not locate executable xlf 
customize IntelFCompiler 
Could not locate executable ifort 
Could not locate executable ifc 
customize GnuFCompiler 
Could not locate executable g77 
customize Gnu95FCompiler 
Found executable /usr/local/bin/gfortran 
customize Gnu95FCompiler 
customize Gnu95FCompiler using config 
C compiler: llvm-gcc-4.2 -fno-strict-aliasing -fno-common -dynamic -g -Os -pipe -fno- common -fno-strict-aliasing -fwrapv -mno-fused-madd -DENABLE_DTRACE -DMACOSX -DNDEBUG -Wall - Wstrict-prototypes -Wshorten-64-to-32 -DNDEBUG -g -fwrapv -Os -Wall -Wstrict-prototypes - DENABLE_DTRACE -arch i386 -arch x86_64 -pipe 

compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core - Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath - Inumpy/core/include - I/System/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6 -c' 
llvm-gcc-4.2: _configtest.c 
sh: llvm-gcc-4.2: command not found 
sh: llvm-gcc-4.2: command not found 
failure. 
removing: _configtest.c _configtest.o 
Traceback (most recent call last): 
    File "<string>", line 14, in <module> 
    File "/Users/MYUSERNAME/build/numpy/setup.py", line 214, in <module> 
    setup_package() 
    File "/Users/MYUSERNAME/build/numpy/setup.py", line 207, in setup_package 
    configuration=configuration) 
    File "/Users/MYUSERNAME/build/numpy/numpy/distutils/core.py", line 186, in setup 
    return old_setup(**new_attr) 
    File  "/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/distutils/core.py",  line 152, in setup 
    File  "/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/distutils/dist.py",  line 975, in run_commands 
    File "/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/distutils/dist.py", line 995, in run_command 
    File "/Users/MYUSERNAME/build/numpy/numpy/distutils/command/egg_info.py", line 8, in  run 
    self.run_command("build_src") 
    File "/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/distutils/cmd.py", line 333, in run_command 
    File "/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/distutils/dist.py",  line 995, in run_command 
    File "/Users/MYUSERNAME/build/numpy/numpy/distutils/command/build_src.py", line 152, in run 
    self.build_sources() 
    File "/Users/MYUSERNAME/build/numpy/numpy/distutils/command/build_src.py", line 163, in build_sources 
    self.build_library_sources(*libname_info) 
    File "/Users/MYUSERNAME/build/numpy/numpy/distutils/command/build_src.py", line 298, in build_library_sources 
    sources = self.generate_sources(sources, (lib_name, build_info)) 
    File "/Users/MYUSERNAME/build/numpy/numpy/distutils/command/build_src.py", line 385, in generate_sources 
    source = func(extension, build_dir) 
    File "numpy/core/setup.py", line 696, in get_mathlib_info 
    raise RuntimeError("Broken toolchain: cannot link a simple C program") 
RuntimeError: Broken toolchain: cannot link a simple C program 
Complete output from command python setup.py egg_info: 
Running from numpy source directory.non-existing path in 'numpy/distutils': 'site.cfg' 

F2PY Version 2 

blas_opt_info: 

FOUND: 

extra_link_args = ['-Wl,-framework', '-Wl,Accelerate'] 

define_macros = [('NO_ATLAS_INFO', 3)] 

extra_compile_args = ['-msse3', '-I/System/Library/Frameworks/vecLib.framework/Headers'] 



lapack_opt_info: 

FOUND: 

extra_link_args = ['-Wl,-framework', '-Wl,Accelerate'] 

define_macros = [('NO_ATLAS_INFO', 3)] 

extra_compile_args = ['-msse3'] 



running egg_info 

running build_src 

build_src 

building py_modules sources 

creating build 

creating build/src.macosx-10.7-intel-2.6 

creating build/src.macosx-10.7-intel-2.6/numpy 

creating build/src.macosx-10.7-intel-2.6/numpy/distutils 

building library "npymath" sources 

customize NAGFCompiler 

Could not locate executable f95 

customize AbsoftFCompiler 

Could not locate executable f90 

Could not locate executable f77 

customize IBMFCompiler 

Could not locate executable xlf90 

Could not locate executable xlf 

customize IntelFCompiler 

Could not locate executable ifort 

Could not locate executable ifc 

customize GnuFCompiler 

Could not locate executable g77 

customize Gnu95FCompiler 

Found executable /usr/local/bin/gfortran 

customize Gnu95FCompiler 

customize Gnu95FCompiler using config 

C compiler: llvm-gcc-4.2 -fno-strict-aliasing -fno-common -dynamic -g -Os -pipe -fno-common -fno-strict-aliasing -fwrapv -mno-fused-madd -DENABLE_DTRACE -DMACOSX -DNDEBUG -Wall -Wstrict-prototypes -Wshorten-64-to-32 -DNDEBUG -g -fwrapv -Os -Wall -Wstrict-prototypes -DENABLE_DTRACE -arch i386 -arch x86_64 -pipe 



compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/include -I/System/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6 -c' 

llvm-gcc-4.2: _configtest.c 

sh: llvm-gcc-4.2: command not found 

sh: llvm-gcc-4.2: command not found 

failure. 

removing: _configtest.c _configtest.o 

Traceback (most recent call last): 

File "<string>", line 14, in <module> 

File "/Users/MYUSERNAME/build/numpy/setup.py", line 214, in <module> 

setup_package() 

File "/Users/MYUSERNAME/build/numpy/setup.py", line 207, in setup_package 

configuration=configuration) 

File "/Users/MYUSERNAME/build/numpy/numpy/distutils/core.py", line 186, in setup 

return old_setup(**new_attr) 

File "/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/distutils/core.py", line 152, in setup 

File "/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/distutils/dist.py", line 975, in run_commands 

File "/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/distutils/dist.py", line 995, in run_command 

File "/Users/MYUSERNAME/build/numpy/numpy/distutils/command/egg_info.py", line 8, in run 

self.run_command("build_src") 

File "/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/distutils/cmd.py", line 333, in run_command 

File "/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/distutils/dist.py", line 995, in run_command 

File "/Users/MYUSERNAME/build/numpy/numpy/distutils/command/build_src.py", line 152, in run 

self.build_sources() 

File "/Users/MYUSERNAME/build/numpy/numpy/distutils/command/build_src.py", line 163, in build_sources 

self.build_library_sources(*libname_info) 

File "/Users/MYUSERNAME/build/numpy/numpy/distutils/command/build_src.py", line 298, in build_library_sources 

sources = self.generate_sources(sources, (lib_name, build_info)) 

File "/Users/MYUSERNAME/build/numpy/numpy/distutils/command/build_src.py", line 385, in generate_sources 

source = func(extension, build_dir) 

File "numpy/core/setup.py", line 696, in get_mathlib_info 

raise RuntimeError("Broken toolchain: cannot link a simple C program") 

RuntimeError: Broken toolchain: cannot link a simple C program 

---------------------------------------- 
Command python setup.py egg_info failed with error code 1 in  /Users/MYUSERNAME/build/numpy 
Storing complete log in /Users/MYUSERNAME/Library/Logs/pip.log

我真的很感謝所有幫助/評論/指導

來源

2012-08-05 NNsr

+0

@abarnert：？非常感謝您的幫助，請讓我知道，如果有適合我的方式（僅限美國呃）發佈完整的日誌。我得到一個錯誤，說我需要更多的信譽來發送很長的問題。如有必要，我可以將其上傳到網站或其他東西。乾杯 – NNsr 2012-08-05 14:50:13

+1

你最好把它貼到一個pastebin（或者等同）代碼中，然後總結一下你的問題。 SO格式喜歡一個特定的點，而不是一個巨大的數據轉儲......請把此作爲一個建設性的批評請:)然後有足夠代表的人。可以編輯你的問題，或者可以發表評論，要求你挑出一些問題並修改你的問題......然後，希望你得到一個答案，並將其與所有相關點存檔以幫助其他人以後出... – 2012-08-05 15:05:55

+2

您是否從Xcode安裝命令行工具？ – tabchas 2012-08-05 15:23:14

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