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我最近刪除了幾個R包(使用remove.packages()),並重新安裝了它們的最新版本。我試着用下面的語法重新安裝庫網:ggplot2命名空間加載失敗,網格描述失敗
url <- "https://cran.r-project.org/src/contrib/Archive/grid/grid_0.7-4.tar.gz"
pkgFile <- "grid_0.7-4.tar.gz"
download.file(url = url, destfile = pkgFile)
install.packages(pkgs=pkgFile, type="source", repos=NULL)
unlink(pkgFile)
我收到了以下警告和錯誤:
Error : Invalid DESCRIPTION file
Invalid package name.
This is the name of a base package.
See section 'The DESCRIPTION file' in the 'Writing R Extensions'
manual.
ERROR: installing package DESCRIPTION failed for package ‘grid’
* removing ‘/Library/Frameworks/R.framework/Versions/3.3/Resources/library/grid’
Warning in install.packages :
installation of package ‘/Users/lindz/RNASeqVisualization/grid_0.7-4.tar.gz’ had non-zero exit status
看來現在電網是基礎R的一部分,所以我暫時繼續前進。然而,在重新安裝使用包GGPLOT2:
install.packages("ggplot2")
我收到以下警告:
Warning in install.packages :
URL 'https://R-Forge.R-project.org/src/contrib/PACKAGES.gz': status was '400 Bad Request'
Warning in install.packages :
URL 'https://R-Forge.R-project.org/src/contrib/PACKAGES': status was '400 Bad Request'
Warning in install.packages :
unable to access index for repository https://R-Forge.R-project.org/src/contrib:
cannot download all files
Warning in install.packages :
URL 'https://R-Forge.R-project.org/src/contrib/PACKAGES.gz': status was '400 Bad Request'
Warning in install.packages :
URL 'https://R-Forge.R-project.org/src/contrib/PACKAGES': status was '400 Bad Request'
Warning in install.packages :
unable to access index for repository https://R-Forge.R-project.org/src/contrib:
cannot download all files
Warning in install.packages :
dependency ‘grid’ is not available
Warning in install.packages :
unable to access index for repository https://www.stats.ox.ac.uk/pub/RWin/bin/macosx/mavericks/contrib/3.3:
Line starting '<!DOCTYPE html> ...' is malformed!
Warning in install.packages :
URL 'http://www.omegahat.net/R/bin/macosx/mavericks/contrib/3.3/PACKAGES.gz': status was '404 Not Found'
Warning in install.packages :
URL 'http://www.omegahat.net/R/bin/macosx/mavericks/contrib/3.3/PACKAGES': status was '404 Not Found'
Warning in install.packages :
unable to access index for repository http://www.omegahat.net/R/bin/macosx/mavericks/contrib/3.3:
cannot download all files
Warning in install.packages :
URL 'https://R-Forge.R-project.org/bin/macosx/mavericks/contrib/3.3/PACKAGES.gz': status was '400 Bad Request'
Warning in install.packages :
URL 'https://R-Forge.R-project.org/bin/macosx/mavericks/contrib/3.3/PACKAGES': status was '400 Bad Request'
Warning in install.packages :
unable to access index for repository https://R-Forge.R-project.org/bin/macosx/mavericks/contrib/3.3:
cannot download all files
Warning in install.packages :
URL 'https://www.rforge.net/bin/macosx/mavericks/contrib/3.3/PACKAGES.gz': status was '404 Not Found'
Warning in install.packages :
URL 'https://www.rforge.net/bin/macosx/mavericks/contrib/3.3/PACKAGES': status was '404 Not Found'
Warning in install.packages :
unable to access index for repository https://www.rforge.net/bin/macosx/mavericks/contrib/3.3:
cannot download all files
當我然後跑:
library(ggplot2)
我收到的錯誤:
Error : package ‘grid’ does not have a namespace
Error: package or namespace load failed for ‘ggplot2’
我不確定wha在這一點上做。我看過類似的帖子(R error package grid does not have a namespace),但他們的解決方案不適用於我的。我沒有網格保存在我的任何庫中,因爲我已經卸載它(使用remove.packages())。
我sessionInfo()如下:
R version 3.3.1 (2016-06-21)
Platform: x86_64-apple-darwin13.4.0 (64-bit)
Running under: OS X 10.9.5 (Mavericks)
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] ggenealogy_0.2.0
loaded via a namespace (and not attached):
[1] rsconnect_0.4.3 tools_3.3.1
任何意見將非常感謝!
謝謝你的幫助。我現在嘗試install.packages(「ggplot2」,repos ='http://cran.us.r-project.org')。這隻給了我一個警告:「依賴'網格'不可用」。但是,當我再次執行庫(ggplot2)時,我收到了相同的兩個錯誤(「錯誤:程序包'網格'沒有命名空間 錯誤:程序包或名稱空間加載失敗'ggplot2'」) – LanneR
嘗試重新安裝R的新副本,並且如果你有'.Rprofile',請註釋掉。 – baptiste