要比較兩個列表，找到相似之處

-4

C 
E

我想找到這些在下表（表1），並寫入到第二個表（表2）

有沒有人有python或perl腳本來做到這一點？

表1：

A MU_ADO_2 1099 MU_ADO_2.1099 o o o o o o o o o o 7.82436 s_3_merged Suseptible A AG 2 4 0 2 0                    
A MU_ADO_2 1105 MU_ADO_2.1105 327.008 s_2_merged Resistance G GT 81 0 2 132 79 31.5281 s_6_merged Resistance G GT 8 0 1 8 7 34.9813 s_3_merged Suseptible G GT 7 0 0 3 7 7.82436 s_7_merged Suseptible G GT 2 0 0 4 2 
A MU_ADO_2 1110 MU_ADO_2.1110 515.963 s_2_merged Resistance A AT 113 96 1 2 110 31.5281 s_6_merged Resistance A AT 7 8 0 0 7 16.3388 s_3_merged Suseptible A AT 4 7 0 0 4 13.808 s_7_merged Suseptible A AT 3 3 0 0 3 
A MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
B MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
B MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
B MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
C MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
C MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
C MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
C MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
C MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
C MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
C MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
D MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
D MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
D MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
D MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
D MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
D MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
D MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
D MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
D MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
E MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
E MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
E MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
E MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
F MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
F MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
F MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
F MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
F MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0

表2：

C MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
C MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
C MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
C MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
C MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
C MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
C MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
E MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
E MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
E MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0 
E MU_ADO_2 1120 MU_ADO_2.1120 1.00E+06 s_2_merged Resistance A AG 169 107 1 167 1 36.1308 s_6_merged Resistance A AG 8 9 0 8 0 35.6751 s_7_merged Suseptible A AG 7 2 0 7 0 20.9415 s_3_merged Suseptible A AG 5 8 0 5 0

來源

2011-08-24 user690462

你嘗試過什麼至今？「C E」是什麼意思？你想找什麼？ – daveydave400

現在你的表格被編輯了（謝謝F.J）我唯一的問題是你到目前爲止嘗試了什麼？ – daveydave400

替代，在python：

keys = ['C', 'E'] 
with open('out.txt', 'a') as out: 
    with open('test.txt') as f: 
     for line in f: 
      for key in keys: 
       if line.startswith(key): 
        out.write(line) 
        break

test.txt是一個包含您的表1的文件，複製粘貼。
out.txt是你得到你的表的文件2

來源

2011-08-24 19:41:55 joaquin

你需要在你的循環中的'write'之後有一個'break'，以便使它更有效率，或者相當於Python 2.7中的兩行 - 「open（'out.txt'，'a'）out，open 'test.txt'）as f：'then'out.writelines（line for line in f if（line.startswith（key）for keys in keys））' – agf

@agf，我包含了一個break。對於其他人來說，我更願意讓代碼儘可能簡單，而這些代碼似乎是SO中的新手。 – joaquin

是的，我不是真的推薦高爾夫版本，如果是好的話，打破循環+。 – agf

如果你的問題是：「如何可以的，如果過濾該文件只看到第一場等於C或E條目？「

那麼下面應該工作：

awk '$1 ~ /[CE]/ { print $0 }' yourfile > outfile

如果你想在清晰度爲代價節省一些按鍵，以下也適用：

awk '$1 ~ /[CE]/' yourfile > outfile

來源

2011-08-24 19:25:15

它需要Perl中的所有三個字符。所以呢？您還擁有無限更好的正則表達式 - 以及真正的™編程語言。還要注意，你的代碼並沒有做你說的那樣。哎呦！ – tchrist

@tchrist放鬆，Perl比awk好，我不是想要開始一場聖戰，我會刪除讓你不高興的評論。但是，據我所知，這是有效的，讓我知道你發現了什麼錯誤。 –

評論只是挑釁的一切。但是，您的代碼會檢測第一個字段是否包含C或E，這與說'$ 1 =='C「||有很大區別。 $ 1 ==「E」'，這就是你的「第一個字段等於'C'或'E'」所說的。我並沒有對正確性做出判斷，只是指出代碼描述與代碼所做的不一致。一個Perl解決方案是'perl -ne'/^[CE]/&& print''，儘管我更喜歡'print if/^ [CE] /'更可讀。 – tchrist

由於包含的是awk標籤我」假設您對其他* nix實用程序開放，這裏是一個sed解決方案：

sed '/^[^CE]/d' table1.txt > table2.txt

這將刪除從table1.txt所有行不使用C或E

來源

2011-08-24 19:25:22

假設「CE」名單開始來自於一個文件：

awk ' 
    FILENAME == ARGV[1] {list[$1]; next} 
    $1 in list {print} 
' list.txt table1 > table2

來源

2011-08-24 19:34:41

如何的grep

grep -e '^[CE]' source.file

，你可以重定向到一個新的文件，以及：

grep -e '^[CE]' source.file > dest.file

來源

2011-08-24 20:20:21 Axeman

乾淨簡單！ – flies

不錯！從'awk'到'sed'到'grep'的過程不斷導致更簡單的答案。 –

要比較兩個列表，找到相似之處

回答

相關問題