2014-04-03 250 views
2

我在OS X 10.9.2上安裝了帶有mac端口的R 3.0.3。我使用sudo R CMD INSTALL〜/ Downloads/RInside_0.2.11.tgz(類似於Rcpp_0.11.1.tar)安裝了RInside。我正在嘗試從http://dirk.eddelbuettel.com/code/rinside.html編譯一個簡單的RInside幫助世界代碼。我試圖用Mac OS X上的RInside

g++ main.cpp -I/Users/robogos/Library/R/3.0/library/RInside/include/ -I/Users/robogos/Library/R/3.0/library/Rcpp/include/ -I/opt/local/Library/Frameworks/R.framework/Versions/3.0/Resources/include/ 

和我得到的錯誤的一個長長的清單:

Undefined symbols for architecture x86_64: 
    "_REprintf", referenced from: 
     Rcpp::Rstreambuf<false>::xsputn(char const*, long) in main-4b77b4.o 
     Rcpp::Rstreambuf<false>::overflow(int) in main-4b77b4.o 
    "_R_BindingIsLocked", referenced from: 
     Rcpp::Environment_Impl<Rcpp::PreserveStorage>::bindingIsLocked(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&) const in main-4b77b4.o 
    "_R_FlushConsole", referenced from: 
     Rcpp::Rstreambuf<false>::sync() in main-4b77b4.o 
     Rcpp::Rstreambuf<true>::sync() in main-4b77b4.o 
    "_R_NilValue", referenced from: 
     Rcpp::wrap(char const*) in main-4b77b4.o 
    "_R_UnboundValue", referenced from: 
     Rcpp::Environment_Impl<Rcpp::PreserveStorage>::exists(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&) const in main-4b77b4.o 
    "_Rf_defineVar", referenced from: 
     Rcpp::Environment_Impl<Rcpp::PreserveStorage>::assign(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, SEXPREC*) const in main-4b77b4.o 
    "_Rf_findVarInFrame", referenced from: 
     Rcpp::Environment_Impl<Rcpp::PreserveStorage>::exists(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&) const in main-4b77b4.o 
    "_Rf_install", referenced from: 
     Rcpp::Environment_Impl<Rcpp::PreserveStorage>::assign(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, SEXPREC*) const in main-4b77b4.o 
     Rcpp::Environment_Impl<Rcpp::PreserveStorage>::exists(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&) const in main-4b77b4.o 
     Rcpp::Environment_Impl<Rcpp::PreserveStorage>::bindingIsLocked(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&) const in main-4b77b4.o 
    "_Rf_mkString", referenced from: 
     Rcpp::wrap(char const*) in main-4b77b4.o 
    "_Rprintf", referenced from: 
     Rcpp::Rstreambuf<true>::xsputn(char const*, long) in main-4b77b4.o 
     Rcpp::Rstreambuf<true>::overflow(int) in main-4b77b4.o 
    "RInside::parseEvalQ(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&)", referenced from: 
     _main in main-4b77b4.o 
    "RInside::RInside(int, char const* const*, bool, bool, bool)", referenced from: 
     _main in main-4b77b4.o 
    "RInside::~RInside()", referenced from: 
     _main in main-4b77b4.o 
    "RInside::operator[](std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&)", referenced from: 
     _main in main-4b77b4.o 
ld: symbol(s) not found for architecture x86_64 
clang: error: linker command failed with exit code 1 (use -v to see invocation) 

我已經試了一下德克Eddelbuettel建議,但現在我得到:

Error in dyn.load(file, DLLpath = DLLpath, ...) : 
    unable to load shared object '/Library/Frameworks/R.framework/Versions/3.0/Resources/library/stats/libs/stats.so': 
    dlopen(/Library/Frameworks/R.framework/Versions/3.0/Resources/library/stats/libs/stats.so, 6): Symbol not found: __gfortran_pow_r8_i4 
    Referenced from: /Library/Frameworks/R.framework/Versions/3.0/Resources/lib/libRlapack.dylib 
    Expected in: /Applications/MATLAB_R2013a.app/sys/os/maci64//libgfortran.2.dylib 
in /Library/Frameworks/R.framework/Versions/3.0/Resources/lib/libRlapack.dylib 
During startup - Warning message: 
package ‘stats’ in options("defaultPackages") was not found 
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
    unable to load shared object '/Library/Frameworks/R.framework/Versions/3.0/Resources/library/stats/libs/stats.so': 
    dlopen(/Library/Frameworks/R.framework/Versions/3.0/Resources/library/stats/libs/stats.so, 6): Symbol not found: __gfortran_pow_r8_i4 
    Referenced from: /Library/Frameworks/R.framework/Versions/3.0/Resources/lib/libRlapack.dylib 
    Expected in: /Applications/MATLAB_R2013a.app/sys/os/maci64//libgfortran.2.dylib 
in /Library/Frameworks/R.framework/Versions/3.0/Resources/lib/libRlapack.dylib 
During startup - Warning message: 
package ‘stats’ in options("defaultPackages") was not found 
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
    unable to load shared object '/Library/Frameworks/R.framework/Versions/3.0/Resources/library/stats/libs/stats.so': 
    dlopen(/Library/Frameworks/R.framework/Versions/3.0/Resources/library/stats/libs/stats.so, 6): Symbol not found: __gfortran_pow_r8_i4 
    Referenced from: /Library/Frameworks/R.framework/Versions/3.0/Resources/lib/libRlapack.dylib 
    Expected in: /Applications/MATLAB_R2013a.app/sys/os/maci64//libgfortran.2.dylib 
in /Library/Frameworks/R.framework/Versions/3.0/Resources/lib/libRlapack.dylib 
During startup - Warning message: 
package ‘stats’ in options("defaultPackages") was not found 
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
    unable to load shared object '/Library/Frameworks/R.framework/Versions/3.0/Resources/library/stats/libs/stats.so': 
    dlopen(/Library/Frameworks/R.framework/Versions/3.0/Resources/library/stats/libs/stats.so, 6): Symbol not found: __gfortran_pow_r8_i4 
    Referenced from: /Library/Frameworks/R.framework/Versions/3.0/Resources/lib/libRlapack.dylib 
    Expected in: /Applications/MATLAB_R2013a.app/sys/os/maci64//libgfortran.2.dylib 
in /Library/Frameworks/R.framework/Versions/3.0/Resources/lib/libRlapack.dylib 
During startup - Warning message: 
package ‘stats’ in options("defaultPackages") was not found 
make: Nothing to be done for `rinside_sample0.cpp'. 

我有看到建議像!unset DYLD_LIBRARY_PATH;,但我不知道如何做到這一點在我的情況。

+0

您是否從源代碼構建了RInside?如果沒有,請嘗試。 –

+0

我已經從http://cran.r-project.org/web/packages/RInside/index.html下載並使用'R CMD INSTALL〜/ Downloads/RInside_0.2.11.tgz'進行安裝。但是,R是使用Macports安裝的。 – robogos

+0

通過'R CMD INSTALL RInside_0.2.11.tar.gz'安裝_from source_。請注意'tar.gz'而不是'.tgz'。 –

回答

0

使用模式是

  • 光盤放入examples/standard/目錄

  • 運行make

  • 或運行make rinside_sample0(或任何其他名稱),如果你想建立只有一個。

您可以添加自己的文件,make nameofthefile將生成可執行文件。

總之,你不能像你那樣打電話g++

+0

謝謝。我試過了,似乎也有一個不同的問題: – robogos

+1

@DirkEddelbuettel這樣做會產生錯誤:'致命錯誤:'找不到RInside.h'文件'你知道如何解決這個問題嗎? – warship

+0

@Dirk Eddelbuettel手動將所有必需的頭文件放入適當的位置運行所有內容後,我的OSX 10.9 Mavericks上出現以下錯誤:'ld:symbol(s)not found for architecture x86_64'後面​​跟'clang:error :鏈接器命令失敗,退出代碼1(使用-v查看調用)'和make:*** [rinside_sample0] Error 1' – warship